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Re: [aria-discuss] Error during PSF-file generation


Chronological Thread  
  • From: Benjamin Bardiaux <bardiaux AT pasteur.fr>
  • To: <aria-discuss AT services.cnrs.fr>, <julien.cappele AT univ-lorraine.fr>
  • Subject: Re: [aria-discuss] Error during PSF-file generation
  • Date: Thu, 1 Oct 2020 11:35:43 +0200
  • Authentication-results: mx1.pasteur.fr; spf=None smtp.mailfrom=benjamin.bardiaux AT pasteur.fr; spf=None smtp.helo=postmaster AT EXCHANGE02.corp.pasteur.fr
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  • Organization: CNRS

Hi Julien,

On 01/10/2020 11:11, julien.cappele AT univ-lorraine.fr wrote:
Good morning/afternoon everyone,

I am a PhD student and I am currently trying to locally calculate some NMR
structures with Aria, on a Ubuntu 20.04 LTS plateform.
To be honest, I've been trying for a week now and I finally installed
"correctly" all the softwares (Aria2.3, CNS1.2) and I am using CcpNmr 2.5.0.

What does the check.py script tells you about Tix being installed ?


I'm doing the tutorial dedicated to structure calculation of CcpNmr.
However, now that the project is finally set up, I get an error when i'm
starting the calculation with Aria.
Using this command: $ aria2 /path/to/my/project/project.xml, I get a strange
error that I cannot understand.

"IOError: USER ERROR <aria.cns.CNS> File "/some/path/to/aria2.3.2_05.08.2019/
aria2.3/src/py/aria/cns.py", line 2038 in prepare
An error occurered during creation of the PSF-file: "/some/path/to/Tutorials/
CcpnCourse3a/run1/cns/begin/CcpnCourse3a.psf" could not be found."

check the run1/cns/begin/generate.out for ERROR, this should tell you more
about the issue.

Best,

Benjamin


Also, I cannot use the GUI interface with Aria because I get a strange error
about Tix package being not installed and I didn't find any solution to it.

Does someone have a solution to this problem ?
Thanks a lot for your time.

JC



--
---------------------------------------------
Dr Benjamin Bardiaux bardiaux AT pasteur.fr
Unité de Bioinformatique Structurale
CNRS UMR3528 - Institut Pasteur
25,28 rue du Docteur Roux 75015 Paris, France
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